read_buffalo_xml_data.py¶
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read_buffalo_xml_data.
processXML
()[source]¶ used to construct ‘resources/buffalo_sample_metadata.csv’
# it uses the following xml files “ERS2495773-ERS2495833.xml”, “ERS2495835-ERS2495900.xml”,”ERS2495902-ERS2495992.xml”
# which are obtained from here (there is an xml download link on the page): https://www.ebi.ac.uk/ena/data/view/ERS2495773-ERS2495833 https://www.ebi.ac.uk/ena/data/view/ERS2495835-ERS2495900 https://www.ebi.ac.uk/ena/data/view/ERS2495902-ERS2495992